Whole-cell modeling forum

The only sub-model which uses constraint based modeling is the metabolic sub-model. The other sub-models use different mathematical formalisms which aren't compatible with COBRA.

We do use the COBRA toolbox to output this sub-model to SBML (see: ). The SBML file is available at .

Thanks - I appreciate the pointers and quick response (and also the fact that it is already a supported feature!), will try it out starting today.